Use the Previous and Next buttons to navigate the slides or the slide controller buttons at the end to navigate through each slide. Finally, the sum of the features importance value on each tree is calculated then divided by the total number of trees as in Eq. In general, feature selection (FS) methods are widely employed in various applications of medical imaging applications. chest X-ray images into three classes of COVID-19, normal chest X-ray and other lung diseases. Also, image segmentation can extract critical features, including the shape of tissues, and texture5,6. 2. It based on using a deep convolutional neural network (Inception) for extracting features from COVID-19 images, then filtering the resulting features using Marine Predators Algorithm (MPA), enhanced by fractional-order calculus(FO). Med. Civit-Masot et al. Acharya, U. R. et al. and A.A.E. Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. Wish you all a very happy new year ! The predator uses the Weibull distribution to improve the exploration capability. As seen in Table3, on Dataset 1, the FO-MPA outperformed the other algorithms in the mean of fitness value as it achieved the smallest average fitness function value followed by SMA, HHO, HGSO, SCA, BGWO, MPA, and BPSO, respectively whereas, the SGA and WOA showed the worst results. Scientific Reports (Sci Rep) 4b, FO-MPA algorithm selected successfully fewer features than other algorithms, as it selected 130 and 86 features from Dataset 1 and Dataset 2, respectively. They applied the SVM classifier for new MRI images to segment brain tumors, automatically. Keywords - Journal. Also, it has killed more than 376,000 (up to 2 June 2020) [Coronavirus disease (COVID-2019) situation reports: (https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/)]. (1): where \(O_k\) and \(E_k\) refer to the actual and the expected feature value, respectively. Tree based classifier are the most popular method to calculate feature importance to improve the classification since they have high accuracy, robustness, and simple38. 40, 2339 (2020). Slider with three articles shown per slide. The variants of concern are Alpha, Beta, Gamma, and than the COVID-19 images. Experimental results have shown that the proposed Fuzzy Gabor-CNN algorithm attains highest accuracy, Precision, Recall and F1-score when compared to existing feature extraction and classification techniques. Toaar, M., Ergen, B. arXiv preprint arXiv:1409.1556 (2014). Feature selection based on gaussian mixture model clustering for the classification of pulmonary nodules based on computed tomography. Contribute to hellorp1990/Covid-19-USF development by creating an account on GitHub. You have a passion for computer science and you are driven to make a difference in the research community? Moreover, a multi-objective genetic algorithm was applied to search for the optimal features subset. The Shearlet transform FS method showed better performances compared to several FS methods. In this paper, we used TPUs for powerful computation, which is more appropriate for CNN. Stage 2 has been executed in the second third of the total number of iterations when \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\). contributed to preparing results and the final figures. Netw. Google Scholar. The symbol \(R_B\) refers to Brownian motion. Zhu, H., He, H., Xu, J., Fang, Q. Marine memory: This is the main feature of the marine predators and it helps in catching the optimal solution very fast and avoid local solutions. Both the model uses Lungs CT Scan images to classify the covid-19. Chollet, F. Keras, a python deep learning library. Etymology. Da Silva, S. F., Ribeiro, M. X., Neto, Jd. arXiv preprint arXiv:2003.11597 (2020). Artif. For both datasets, the Covid19 images were collected from patients with ages ranging from 40-84 from both genders. Sahlol, A.T., Yousri, D., Ewees, A.A. et al. Abadi, M. et al. \(\Gamma (t)\) indicates gamma function. Also, all other works do not give further statistics about their models complexity and the number of featurset produced, unlike, our approach which extracts the most informative features (130 and 86 features for dataset 1 and dataset 2) that imply faster computation time and, accordingly, lower resource consumption. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. Design incremental data augmentation strategy for COVID-19 CT data. (2) calculated two child nodes. For each decision tree, node importance is calculated using Gini importance, Eq. Chong et al.8 proposed an FS model, called Robustness-Driven FS (RDFS) to select futures from lung CT images to classify the patterns of fibrotic interstitial lung diseases. The . 11, 243258 (2007). Nguyen, L.D., Lin, D., Lin, Z. Phys. The test accuracy obtained for the model was 98%. Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. used a dark Covid-19 network for multiple classification experiments on Covid-19 with an accuracy of 87% [ 23 ]. Faramarzi et al.37 divided the agents for two halves and formulated Eqs. M.A.E. \(\bigotimes\) indicates the process of element-wise multiplications. Cite this article. 4a, the SMA was considered as the fastest algorithm among all algorithms followed by BPSO, FO-MPA, and HHO, respectively, while MPA was the slowest algorithm. Imaging Syst. It also shows that FO-MPA can select the smallest subset of features, which reflects positively on performance. Detection of lung cancer on chest ct images using minimum redundancy maximum relevance feature selection method with convolutional neural networks. Kharrat, A. In Dataset 2, FO-MPA also is reported as the highest classification accuracy with the best and mean measures followed by the BPSO. Softw. While no feature selection was applied to select best features or to reduce model complexity. Chong, D. Y. et al. Litjens, G. et al. The MPA starts with the initialization phase and then passing by other three phases with respect to the rational velocity among the prey and the predator. Although convolutional neural networks (CNNs) is considered the current state-of-the-art image classification technique, it needs massive computational cost for deployment and training. wrote the intro, related works and prepare results. https://doi.org/10.1155/2018/3052852 (2018). Med. Med. Machine learning (ML) methods can play vital roles in identifying COVID-19 patients by visually analyzing their chest x-ray images. medRxiv (2020). For Dataset 2, FO-MPA showed acceptable (not the best) performance, as it achieved slightly similar results to the first and second ranked algorithm (i.e., MPA and SMA) on mean, best, max, and STD measures. In our example the possible classifications are covid, normal and pneumonia. Syst. Rajpurkar, P. etal. This dataset consists of 219 COVID-19 positive images and 1341 negative COVID-19 images. arXiv preprint arXiv:2003.13145 (2020). \(Fit_i\) denotes a fitness function value. Bisong, E. Building Machine Learning and Deep Learning Models on Google Cloud Platform (Springer, Berlin, 2019). Decaf: A deep convolutional activation feature for generic visual recognition. CAS The classification accuracy of MPA, WOA, SCA, and SGA are almost the same. My education and internships have equipped me with strong technical skills in Python, deep learning models, machine learning classification, text classification, and more. Provided by the Springer Nature SharedIt content-sharing initiative, Environmental Science and Pollution Research (2023), Archives of Computational Methods in Engineering (2023), Arabian Journal for Science and Engineering (2023). Simonyan, K. & Zisserman, A. Sci Rep 10, 15364 (2020). The \(\delta\) symbol refers to the derivative order coefficient. A.T.S. Medical imaging techniques are very important for diagnosing diseases. One from the well-know definitions of FC is the Grunwald-Letnikov (GL), which can be mathematically formulated as below40: where \(D^{\delta }(U(t))\) refers to the GL fractional derivative of order \(\delta\). A survey on deep learning in medical image analysis. In this paper, we apply a convolutional neural network (CNN) to extract features from COVID-19 X-Ray images. Our results indicate that the VGG16 method outperforms . Cohen, J.P., Morrison, P. & Dao, L. Covid-19 image data collection. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). One of the best methods of detecting. The proposed cascaded system is proposed to segment the lung, detect, localize, and quantify COVID-19 infections from computed tomography images, which can reliably localize infections of various shapes and sizes, especially small infection regions, which are rarely considered in recent studies. It is calculated between each feature for all classes, as in Eq. This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. For more analysis of feature selection algorithms based on the number of selected features (S.F) and consuming time, Fig. Eq. 6 (left), for dataset 1, it can be seen that our proposed FO-MPA approach outperforms other CNN models like VGGNet, Xception, Inception, Mobilenet, Nasnet, and Resnet. Background The large volume and suboptimal image quality of portable chest X-rays (CXRs) as a result of the COVID-19 pandemic could post significant challenges for radiologists and frontline physicians. & Wang, W. Medical image segmentation using fruit fly optimization and density peaks clustering. Biomed. The predator tries to catch the prey while the prey exploits the locations of its food. Figure7 shows the most recent published works as in54,55,56,57 and44 on both dataset 1 and dataset 2. Layers are applied to extract different types of features such as edges, texture, colors, and high-lighted patterns from the images. The GL in the discrete-time form can be modeled as below: where T is the sampling period, and m is the length of the memory terms (memory window). Hashim, F. A., Houssein, E. H., Mabrouk, M. S., Al-Atabany, W. & Mirjalili, S. Henry gas solubility optimization: a novel physics-based algorithm. They used different images of lung nodules and breast to evaluate their FS methods. Donahue, J. et al. Deep residual learning for image recognition. Wu, Y.-H. etal. To survey the hypothesis accuracy of the models. This paper reviews the recent progress of deep learning in COVID-19 images applications from five aspects; Firstly, 33 COVID-19 datasets and data enhancement methods are introduced; Secondly, COVID-19 classification methods . PubMed }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! Memory FC prospective concept (left) and weibull distribution (right). (8) can be remodeled as below: where \(D^1[x(t)]\) represents the difference between the two followed events. Eng. While55 used different CNN structures. We have used RMSprop optimizer for weight updates, cross entropy loss function and selected learning rate as 0.0001. Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. It is important to detect positive cases early to prevent further spread of the outbreak. Robustness-driven feature selection in classification of fibrotic interstitial lung disease patterns in computed tomography using 3d texture features. Epub 2022 Mar 3. This algorithm is tested over a global optimization problem. So, for a \(4 \times 4\) matrix, will result in \(2 \times 2\) matrix after applying max pooling. Appl. \end{aligned} \end{aligned}$$, $$\begin{aligned} WF(x)=\exp ^{\left( {\frac{x}{k}}\right) ^\zeta } \end{aligned}$$, $$\begin{aligned}&Accuracy = \frac{\text {TP} + \text {TN}}{\text {TP} + \text {TN} + \text {FP} + \text {FN}} \end{aligned}$$, $$\begin{aligned}&Sensitivity = \frac{\text {TP}}{\text{ TP } + \text {FN}}\end{aligned}$$, $$\begin{aligned}&Specificity = \frac{\text {TN}}{\text {TN} + \text {FP}}\end{aligned}$$, $$\begin{aligned}&F_{Score} = 2\times \frac{\text {Specificity} \times \text {Sensitivity}}{\text {Specificity} + \text {Sensitivity}} \end{aligned}$$, $$\begin{aligned} Best_{acc} = \max _{1 \le i\le {r}} Accuracy \end{aligned}$$, $$\begin{aligned} Best_{Fit_i} = \min _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} Max_{Fit_i} = \max _{1 \le i\le r} Fit_i \end{aligned}$$, $$\begin{aligned} \mu = \frac{1}{r} \sum _{i=1}^N Fit_i \end{aligned}$$, $$\begin{aligned} STD = \sqrt{\frac{1}{r-1}\sum _{i=1}^{r}{(Fit_i-\mu )^2}} \end{aligned}$$, https://doi.org/10.1038/s41598-020-71294-2.
covid 19 image classification